Shifu Chen

Results 184 comments of Shifu Chen

I will fix this soon. You can use the prebuilt version before I submit a fix.

Done, please pull the latest code and try again.

Hi man, the dataset is too big to be uploaded here. I suggest to get some cfDNA and non-cfDNA data from NCBI SRA.

I didn't use Module.func(), trying now... thanks. Another issue, the built executable dir is very big (> 200MB), which makes it not convenient to deploy. Is there any way to...

This issue is gone after use Module.func() But got another error: SystemError("mkdir",17,"alk")

Marked as a new feature request. I will implement it. Thanks

@gk-bioin4m8x have you installed editdistance module? Are u using pypy or native python?

@gk-bioin4m8x How big is your sample data? Did you run them concurrently, or just one by one?

@gk-bioin4m8x I saw you run with the whold folder, it is correct. But performance may be decreased in cygwin. If you didn't see any warning information of editdistance when you...

gk-bioin4m8x how about a 2-column framed homepage, whose left column contains links to different samples and right column is the QC report of corresponding sample?