Shifu Chen

I will update AfterQC to make it adjustable.

I suggest you to use our new tool `fastp` (https://github.com/OpenGene/fastp) to address this issue. With fastp, you can control the output with much more configurable options. And fastp is much...

AfterQC performs automatic adapter trimming, and this is why it causes non-uniform read length.

Adapters should be trimmed before downstream analysis. So AfterQC does it automatically. Would you like an option to disable adapter trimming?

No, don't worry, non-uniform length distribution is never a problem.

AfterQC treats 1024 as 1K, while others treat 1000 as 1K, that's the difference. I will revise AfterQC to treat 1000 as 1K. BTW, I suggest you to use fastp...

There is no executable file. You have to use `python path/to/AfterQC/after.py` Currently AfterQC is only supported by Python2. I have a plan to support Python3, but it requires time to...

AfterQC is designed to run in batch. So, normally AfterQC will create a `QC` folder, and within the `QC` folder there will be folders for different input fastq. You can...

@alezanalp do you agree with @serge2016 ?

I have submitted a commit to implement @serge2016 's idea. You can pull or download the latest master to have a try. Now, you will get ``` QC ├── filename1.fq.html...