zrolfs

NEAT! Build failed, tho :(

I'm thinking about proteoform parsimony... Saw we identified two PrSMs: A) PROTEOFORM (with unlocalized +16 mass shift) B) PROTEOFORM(Ox) We should output a single proteoform "PROTEOFORM(Ox)" for the two, rather...

Can you include a calibration toml and database? I need more info.

It looks like the TMT mods don't have a chemical formula added. Calibration uses this information to calculate the accurate mass and discards the identification if it's not present. For...

I talked with Rob about this and he suggested we supplant the chemical formula with an averagine model for TMT (and other cases). I'm trying this right now to see...

Still working their magic with just 4 carbons and 1 nitrogen for TMT11 

Hi Anthony, Because the intact mass for all of these labels is identical, we can just add the chemical formula to tmt.txt (located in MetaMorpheus\EngineLayer\Mods\tmt.txt I've attached an updated version...

PrecursorMassTolerance = "±34.6907 PPM" ProductMassTolerance = "±5.1149 PPM" Oof. Okay, that's not great. I'll look again.

This is bizzare. I was expecting it to shift the distribution 30 ppm, but it smeared it 

I agree with Anthony. We originally had MetaMorpheus truncate but then removed it for similar reasons.