Results 71 comments of zhanxw

@dajiangliu I think we have an answer for @jiehuang001 . Do you remember the answer/solution?

I guess the v2.0.8 is preferred. Under the rare case I released two versions on the same day, the version number x.x.x seems to be better than date.

This error message showed your memory is exhausted. Can you run it using a large memory machine?

It is most likely that dosages are not integers, and there are rounding errors. For example, if the dosage is 1.5, and the genotype is 1, you will get allele...

Thanks for the comment. I really want to implement it but currently I have a tight schedule...

The current source code supports SKAT-O (--kernel skato). I will draft a release very soon. This implementation is based on SKAT R package and Shawn Lee's SKAT-O paper (in Biostatistics)....

This line `[INFO] Loaded 0 cases, 0 controls, and 2504 missing phenotypes` shows that RVTESTS cannot find the phenotype. Can you provide the first few lines of `/Users/nemanjavucic/Downloads/integrated_call_samples_v2.20130502.ALL.corr.ped` ?

There must be some numeric issues. Will you help provide some example data sets so that I can replicate these errors?

Sorry about this. The two versions in the comparison are 20170613 and 20190205. It is probably due to some bugs discovered in the earlier versions. Please use the newer version...

Similar to what @SirCujo mentioned, you can run twice to each sheet. The concept is: step 1. dump everything xlsx2csv -a excelfile.xlsx all.csv step 2. find how many sheet your...