Wolfgang Maier
Wolfgang Maier
This may come a bit late, but I started working on updating the gemini tool suite and on a fix for the data manager as part of this. Based on...
> Is there an estimate yet on when you'd be ready to publish the update to the MTS? Just general ballpark. If over 2-3 months, we might want to strip...
So the relevant PR is https://github.com/galaxyproject/tools-iuc/pull/2204 The corresponding new versions of the data manager and the gemini tools are also available from the TTS and appear to work well (though...
Wrappers for GEMINI 0.20.1 are now available through the MTS. Since the majority of tools in the suite have received major updates and some tools have been merged into one,...
@jennaj, @davebx For fully functional gemini *query* and gemini *actionable_mutations* tools, you will have to patch a broken hyperlink in the gemini source. It's a single line of code, as...
yes, that's right. The DM opens the file in binary mode, but tries to write a string to it. It must have escaped my attention when I updated the DM,...
@davelopez step 1 for zarr datatype integration
@astrovsky01 could maybe be an interesting alternative to your colabfold tar archive?
Ok, your opinion about the display_data part is a bit diappointing for me. I've spent a considerable amount of time looking at the existing code for the Data datatype class...
Some more debugging info: this is only an issue for collection elements. Works as expected for rule-based upload of regular datasets.