compairr

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Allow multiple indels or more substitutions with a single indel

1

It would be useful if CompAIRR would allow more than one indel. The ability to specify the maximum number of substitutions (Hamming distance), indels, or total changes (Levenshtein distance) would...

torognes

Allow partial V or J gene match

2

Partial matches with V or J gene names could optionally be allowed, perhaps based on prefix matches in the gene name. Need investigate further.

torognes

Distance 2 with indels

1

Due to the way sequence variants are generated, in some cases variants at distance 2 with indels may be generated multiple times and the resulting values may be inaccurate.

torognes