vmd topic

List vmd repositories

SP_Lib

205
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59
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Signal processing method and algorithm library

colvars

192
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55
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Collective variables library for molecular simulation and analysis programs

vmdpy

362
Stars
64
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Variational mode decomposition (VMD) in Python

C4D_MMD_Tool

119
Stars
15
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A plugin for Cinema 4D written in C++ is used to import MikuMikuDance data into Cinema 4D.

meta-data

19
Stars
2
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meta-data datasource for OpenBSD vmd(8)

RMD_Digging

33
Stars
8
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RMD_digging is aimed to provide pre-processing and post-processing tools for the reactive molecular dynamics (ReaxFF) simulations based on MATLAB language, including formatting the reactive force fiel...

clustering

20
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8
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VMD plugin to calculate and visualize clusters of conformations for a trajectory

CEEMDAN_LSTM

217
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42
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CEEMDAN_LSTM is a Python project for decomposition-integration forecasting models based on EMD methods and LSTM.