rare-variant-analysis topic

genetic variant expressions, annotation, and filtering for great good.

brentp

An R package for performing STAAR procedure in whole-genome sequencing studies

xihaoli

This package scales the huge gnomAD files to a SQLite database, which is easy and fast to query. It extracts from a gnomAD vcf the minor allele frequency for each variant.

KalinNonchev

An R package for performing MetaSTAAR procedure in whole-genome sequencing studies

xihaoli

An R package for performing association analysis of whole-genome/whole-exome sequencing (WGS/WES) studies using STAARpipeline

xihaoli

The tutorial for performing single-/multi-trait association analysis of whole-genome/whole-exome sequencing (WGS/WES) studies using FAVORannotator, STAARpipeline and STAARpipelineSummary

xihaoli