population-structure topic

List population-structure repositories

pophelper

136
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37
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An R package to analyse and visualise admixture proportions from STRUCTURE, fastSTRUCTURE, TESS, ADMIXTURE etc.

GWA_tutorial

776
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313
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A comprehensive tutorial about GWAS and PRS

strataG

25
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11
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strataG is a toolkit for haploid sequence and multilocus genetic data summaries, and analyses of population structure.

rhierbaps

33
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3
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rhierbaps: R implementation of hierBAPS

mapmixture

37
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7
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R package and web app for spatial visualisation of admixture on a projected map

qtcat

25
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9
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Quantitative Trait Cluster Association Test in R

knockoffgwas

15
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0
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A flexible tool for the multi-resolution localization of causal variants across the genome, accounting for population structure.