phenotyping topic
List
phenotyping repositories
human-phenotype-ontology
279
Stars
51
Forks
Watchers
Ontology for the description of human clinical features
3dmcap
22
Stars
3
Forks
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3-Demeter Capture is a tool for building 3-D point clouds from images
bety
15
Stars
38
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Web-interface to the Biofuel Ecophysiological Traits and Yields Database (used by PEcAn and TERRA REF)
HPO-translations
20
Stars
12
Forks
Watchers
Internationalisation of the HPO content
cropandweed-dataset
61
Stars
16
Forks
Watchers
Information and scripts for the CropAndWeed Dataset
MIAPPE
21
Stars
9
Forks
Watchers
Minimum Information About a Plant Phenotyping Experiment
DIRT
23
Stars
15
Forks
Watchers
Digital Imaging of Root Traits: Extract trait measurements from images of monocot and dicot roots.
scDINO
34
Stars
8
Forks
Watchers
Self-Supervised Vision Transformers for multiplexed imaging datasets
sentinel2_crop_traits
19
Stars
4
Forks
Watchers
Sentinel-2 Crop Trait Retrieval Using Physiological and Phenological Priors from Field Phenotyping (Graf et al., 2023, RSE)
mammalian-phenotype-ontology
19
Stars
6
Forks
Watchers
Standard terms for annotating mammalian phenotypic data