fluorescence-microscopy-imaging topic
pathml
Tools for computational pathology
ColiCoords
Single-cell fluorescence microscopy data analysis
cyclops
Precision current source, with optional optical feedback, for driving LEDs and laser diodes
ThreeDeconv.jl
A convex 3D deconvolution algorithm for low photon count fluorescence imaging
sparse-deconv-py
Official Python implementation of the 'Sparse deconvolution'-v0.3.0
Sparse-SIM
Official MATLAB implementation of the "Sparse deconvolution" -v1.0.3
PyFRAP
PyFRAP: A Python based FRAP analysis tool box
scDINO
Self-Supervised Vision Transformers for multiplexed imaging datasets
Python_GUI_apps
GLabViz - Interactive Analysis and Visualization Application for Scientific Data written in Python using Qt and pyqtrgaph
ZetaStitcher
ZetaStitcher is a tool designed to stitch large volumetric images such as those produced by Light-Sheet Fluorescence Microscopes.