metatranscriptomics topic

An analysis and visualization platform for 'omics data

merenlab

SortMeRNA: next-generation sequence filtering and alignment tool

sortmerna

sensitive and precise assembly of short sequencing reads

soedinglab

A modular end-to-end suite for in silico recovery, clustering, and analysis of prokaryotic, microeukaryotic, and viral genomes from metagenomes

jolespin

A tool for representing genomic potential and transcriptomic expression into KEGG pathways

iquasere

Meta-Omics Software for Community Analysis

iquasere

Pipeline for metagenome and metatranscriptome joint assembly

ablab

Assembly and annotation of metatranscriptomic or metagenomic data for prokaryotic, eukaryotic and viruses.

nf-core