gwas topic

Iterative hard thresholding for l0 penalized regression

OpenMendel

Specification for the GWAS-VCF format (manuscript in preparation)

MRCIEU

Mixed models @lme4 + custom covariances + parameter constraints

variani

the hierfstat package

jgx65

Convert GWAS summary statistics to VCF

MRCIEU

Rapid standardisation and quality control of GWAS or QTL summary statistics

neurogenomics

GWAS summary statistics files QC tool

Kukuster

Genetics of blood and urine biomarkers in the UK Biobank

rivas-lab

A Suite of Packages for Analysis of Big Genomic Data

QuantGen

Code and simulations using biologically annotated neural networks

lcrawlab