global-health topic
assembly-stats
Get assembly statistics from FASTA and FASTQ files
czid-web
Infectious Disease Sequencing Platform
gubbins
Rapid phylogenetic analysis of large samples of recombinant bacterial whole genome sequences using Gubbins
Fastaq
Python3 scripts to manipulate FASTA and FASTQ files
pathogen-informatics-training
briefcase
ODK Briefcase is a Java application for fetching and pushing forms and their contents. It helps make billions of data points from ODK portable. Contribute and make the world a better place! ✨💼✨
tiptoft
Predict plasmids from uncorrected long read data
central-frontend
Vue.js based frontend for ODK Central
javarosa
The core library that many of the ODK tools are built around. It's written in Java, implements the ODK XForms spec, and runs on mobile devices and cloud servers. ✨🏗✨
skunkworks-crow
Skunkworks-crow is an Android app for sharing filled forms stored in ODK Collect from one device to another