fsl topic

List fsl repositories

BrainPrep

184
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53
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Preprocessing pipeline on Brain MR Images through FSL and ANTs, including registration, skull-stripping, bias field correction, enhancement and segmentation.

clinica

216
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71
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Software platform for clinical neuroimaging studies

ICA-AROMA

86
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53
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ICA-AROMA Software Package: a data-driven method to identify and remove head motion-related artefacts from functional MRI data.

AndysBrainBook

163
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67
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This repository contains the files that generate Andy's Brain Book on ReadTheDocs.

macapype

19
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13
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PNH segmentation pipelines based on nipype

brainextractor

34
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4
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A re-implementation of FSL's Brain Extraction Tool in Python

bids-tools

26
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7
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Tools for dealing with neuroimaging data in the BIDS structure

nipype-preprocess-on-brain-MR

32
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8
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The project is used to do preprocessing on brain MR images by using Nipype.

bspm

20
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17
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Utility MATLAB functions and wrappers for fMRI data analysis, mostly based in SPM12

pTFCE

36
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6
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Probabilistic Threshold-Free Cluster Enhancement of Neuroimages