brain-segmentation topic

List brain-segmentation repositories

HyperDenseNet

147
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41
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This repository contains the code of HyperDenseNet, a hyper-densely connected CNN to segment medical images in multi-modal image scenarios.

LiviaNET

161
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51
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This repository contains the code of LiviaNET, a 3D fully convolutional neural network that was employed in our work: "3D fully convolutional networks for subcortical segmentation in MRI: A large-scal...

BrainPrep

184
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53
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Preprocessing pipeline on Brain MR Images through FSL and ANTs, including registration, skull-stripping, bias field correction, enhancement and segmentation.

DeepBrainSeg

180
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43
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Fully automatic brain tumour segmentation using Deep 3-D convolutional neural networks

brain-segmentation

126
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48
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Deep learning based skull stripping and FLAIR abnormality segmentation in brain MRI using U-Net

QuickNATv2

61
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16
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Fast Whole Brain Segmentation (Layers, codes and Pre-trained Models)

DARTS

67
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24
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Code for DARTS: DenseUnet-based Automatic Rapid Tool for brain Segmentation

macapype

19
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13
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PNH segmentation pipelines based on nipype

Multi-Modal-Brain-Segmentation

19
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5
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3D Multi-modal (FLAIR and T1) Brain MRI Scan Segmentation using Generative Adversarial Learning

nipype-preprocess-on-brain-MR

31
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8
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The project is used to do preprocessing on brain MR images by using Nipype.