freesurfer topic

Software platform for clinical neuroimaging studies

aramis-lab

Neuroimaging analysis and visualization suite

freesurfer

VisualQC : assistive tool to ease the quality control workflow of neuroimaging data.

raamana

Code for DARTS: DenseUnet-based Automatic Rapid Tool for brain Segmentation

NYUMedML

Qoala-T is a supervised-learning tool for quality control of FreeSurfer segmented MRI data

Qoala-T

GNU R package for reading and writing neuroimaging file formats. Not limited to FreeSurfer anymore, despite its name.

dfsp-spirit

R library for structural neuroimaging. Provides high-level functions to access (read and write) and visualize surface-based brain morphometry data for individuals and groups.

dfsp-spirit

Subject-wise networks from structural MRI, both vertex- and voxel-wise features (thickness, GM density, curvature, gyrification)

raamana

Pipeline for Analysing Lesions after Stroke (PALS) is a scalable and user-friendly toolbox designed to facilitate standardised analysis and ensure quality in stroke research using T1-weighted MRIs

npnl