fasta topic

List fasta repositories

pyfaidx

443
Stars
74
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Watchers

Efficient pythonic random access to fasta subsequences

seqan3

390
Stars
80
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The modern C++ library for sequence analysis. Contains version 3 of the library and API docs.

poly

656
Stars
68
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A Go package for engineering organisms.

genomics

190
Stars
54
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A collection of scripts and notes related to genomics and bioinformatics

vsearch

636
Stars
122
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Versatile open-source tool for microbiome analysis

swarm

119
Stars
23
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A robust and fast clustering method for amplicon-based studies

rasusa

193
Stars
17
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Randomly subsample sequencing reads

redundans

127
Stars
19
Forks
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Redundans is a pipeline that assists an assembly of heterozygous/polymorphic genomes.

cljam

90
Stars
12
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A DNA Sequence Alignment/Map (SAM) library for Clojure

PlasFlow

97
Stars
28
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Software for prediction of plasmid sequences in metagenomic assemblies