electron-microscopy topic

A curated list of awesome computational cryo-EM methods.

phonchi

Scalable Optical Flow-based Image Montaging and Alignment

google-research

Workflow for Simulation and Automatic Semantic Segmentation of Electron Microscopy Images

BAMresearch

ArtiaX is an open-source extension of the molecular visualisation program ChimeraX.

FrangakisLab

High Throughput Electron Microscopy Image Processing Software

LBEM-CH

Utilities for building and using the CEM dataset for unsupervised pre-training and downstream tasks.

volume-em

Experimental tech-demo for PhD thesis in Scientific Markdown; official:

katrinleinweber

Python interface for Monte Carlo simulation programs

pymontecarlo

PLEASE: The Python Low-energy Electron Analysis SuitE - Enabling rapid analysis and visualization of LEEM and LEED Data.

mgrady3

A python package collecting an assortment of geometric phase analysis algorithms and tools to analyse regular (moiré) lattices.

TAdeJong