electron-microscopy topic

A collaborative list of awesome CryoEM (Cryo Electron Microscopy) resources.

kuixu

Scientific analysis of nanoscale materials imaging data

pycroscopy

Axon/Myelin segmentation using Deep Learning

axondeepseg

A PyTorch-based library for working with 3D and 2D convolutional neural networks, with focus on semantic segmentation of volumetric biomedical image data

ELEKTRONN

Read and write Neuroglancer datasets programmatically.

seung-lab

Scipion is an image processing framework to obtain 3D models of macromolecular complexes using Electron Microscopy (3DEM)

I2PC

Deep and Machine Learning for Microscopy

pycroscopy

Open pixelated STEM framework

LiberTEM

Collection of algorithms and routines for (ultrafast) electron diffraction and scattering

LaurentRDC

Python program for automated electron diffraction data collection

instamatic-dev