differential-abundance-analysis topic
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differential-abundance-analysis repositories
microbiomeMarker
163
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R package for microbiome biomarker discovery
Maaslin2
104
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35
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MaAsLin2: Microbiome Multivariate Association with Linear Models
Tweedieverse
25
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4
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Differential analysis of multi-omics data based on the Tweedie distribution
ANCOMBC
95
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23
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Differential abundance (DA) and correlation analyses for microbial absolute abundance data
ANCOM-BC-Code-Archive
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Archive: Data, scripts, and outputs for the Nat. Comm. paper "Analysis of Composition of Microbiomes with Bias Correction". Please check our ANCOMBC R package for the most up-to-date ANCOM-BC function...