Common Workflow Language topic
CWL documents describe workflows made of command line data analysis tools in a portable, reproducible, and reusable fashion.
cwltest
Framework for testing CWL tools and workflows
cwlviewer
A web application to view and share Common Workflow Language workflows
user_guide
The CWL v1.0 - v1.2 user guide
tool-registry-service-schemas
APIs for discovering genomics tools, their metadata and their containers
cwl-tes
cwl-tes submits your tasks to a TES server. Task submission is parallelized when possible.
cwl-ts
Typescript data model for Common Workflow Language
workflows
Bioinformatics workflows developed for and used on the St. Jude Cloud project.
emg-viral-pipeline
VIRify: detection of phages and eukaryotic viruses from metagenomic and metatranscriptomic assemblies
janis
[Alpha] Janis: an open source tool to machine generate type-safe CWL and WDL workflows