Common Workflow Language topic

CWL documents describe workflows made of command line data analysis tools in a portable, reproducible, and reusable fashion.

List Common Workflow Language repositories

dockstore

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Our VM/Docker sharing infrastructure and management component

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bunny

74
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[Legacy] Executor for CWL workflows. Executes sbg:draft-2 and CWL 1.0

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cwl-svg

76
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A library for generating an interactive SVG visualization of CWL workflows

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tibanna

69
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27
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Tibanna helps you run your genomic pipelines on Amazon cloud (AWS). It is used by the 4DN DCIC (4D Nucleome Data Coordination and Integration Center) to process data. Tibanna supports CWL/WDL (w/ doc...

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reana

121
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REANA: Reusable research data analysis platform

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bio-cwl-tools

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CWL CommandLineTool descriptions for biology/life-sciences related applications

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VIRTUS

33
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9
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A bioinformatics pipeline for viral transcriptome detection and quantification considering splicing.

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dockstore-ui2

15
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16
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Website user interface for Dockstore in Angular2

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cwl.go

21
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CWL (and input file) parser for Golang, used by github.com/otiai10/yacle

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cwl-utils

31
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Python utilities for CWL

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