cancer-research topic

List cancer-research repositories

TOAD

168
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44
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AI-based pathology predicts origins for cancers of unknown primary - Nature

sigminer

136
Stars
18
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🌲 An easy-to-use and scalable toolkit for genomic alteration signature (a.k.a. mutational signature) analysis and visualization in R https://shixiangwang.github.io/sigminer/reference/index.html

deep-histopath

199
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86
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A deep learning approach to predicting breast tumor proliferation scores for the TUPAC16 challenge

Survival-Analysis-using-Deep-Learning

209
Stars
68
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This repository contains morden baysian statistics and deep learning based research articles , software for survival analysis

PhysiCell

125
Stars
88
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PhysiCell: Scientist end users should use latest release! Developers please fork the development branch and submit PRs to the dev branch. Thanks!

Palimpsest

68
Stars
18
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An R package for studying mutational signatures and structural variant signatures along clonal evolution in cancer.

Chaste

116
Stars
55
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Chaste - Cancer Heart And Soft Tissue Environment - main public repository.

cpsr

54
Stars
12
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Cancer Predisposition Sequencing Reporter (CPSR)

DigiPathAI

63
Stars
25
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Tool to visualize gigantic pathology images and use AI to segment cancer cells and present as an overlay