biomedical-text-mining topic

Cross-type Biomedical Named Entity Recognition with Deep Multi-task Learning (Bioinformatics'19)

yuzhimanhua

Saber is a deep-learning based tool for information extraction in the biomedical domain. Pull requests are welcome! Note: this is a work in progress. Many things are broken, and the codebase is not st...

BaderLab

A neural named entity recognition and multi-type normalization tool for biomedical text mining

dmis-lab

BERN2: an advanced neural biomedical namedentity recognition and normalization tool

dmis-lab

Biomedical Data-to-Text Generation via Fine-Tuning Transformers

bayer-science-for-a-better-life

Tokenization, sentence segmentation, POS tagging and dependency parsing for biomedical texts (BMC Bioinformatics 2019)

datquocnguyen

ncbi

A full-text article retrieval pipeline for biomedical literature.

biomedicalinformaticsgroup

BiOnt: Deep Learning using Multiple Biomedical Ontologies for Relation Extraction

lasigeBioTM

BioDEX: Large-Scale Biomedical Adverse Drug Event Extraction for Real-World Pharmacovigilance.

KarelDO