Tommy Waltmann

Deprecating classes with subclasses

2

Deprecation decorator doesn't work on classes if the class being deprecated has a subclass that inherits from it, even if all the subclasses are marked deprecated as well.

ALJ Overlap Check

3

## Description The code which implements the overlap check in ALJ may give false positives and false negatives. When scripts are run using a debug build, this can cause unwanted...

Re-arrange Some Requirements Files

4

## Description This PR changes the directory of the oldest requirements file so dependabot will not try to bump the versions anymore. ## Motivation and Context On #997 , we...

Run benchmarks on pull requests

2

**Is your feature request related to a problem? Please describe.** In the past, we have accidentally created performance regressions (#694, fixed in #843) when adding features to freud. Our 2.4...

Include tests in Source Tarball

6

**Is your feature request related to a problem? Please describe.** We would like to start unit testing the builds on the feedstock before they are deployed to conda-forge. Right now,...

Autocorrelation Functions

7

**Is your feature request related to a problem? Please describe.** I would like to be able to compute autocorrelation functions in freud. This could either be position or velocity autocorrelation,...

Color Voronoi Diagrams by Area

1

## Description This option adds the ability to color voronoi plots by the area of the Voronoi polytopes. It involves an API change from the option `color_by_sides=True/False` to `color_by='sides'/''area'/None`. ##...

### Description Add a link to Brandon's thesis in the docstring of `freud.order.ContinuousCoordination`. ### Motivation and Context Brandon's thesis is the motivation for adding the `ContinuousCoordination` compute to freud, but...

### Description We have non-functional examples in our documentation demonstrating the use of garnett. This issue is to document that these examples need to be removed. ### Motivation and Context...

### Feature description I would like to get the distance to the surface of the shape for ellispoids ### Proposed solution add a `distance_to_surface` method for ellipsoids ### Additional context...