tbrunetti

@loraince thanks for sharing this. I too am going to use deepTools2 for a ChIP-seq experiment (not ATAC) and I wanted to confirm that your bed output from chromap converted...

This is very helpful, thank you! Out of curiosity are these commands also supported on macs3, or should I strictly use macs2?

I get this error consistently on SLURM as well but mine is only a heartbeat error, nothing to do with memory or resources. Interestingly, it only happens with some seeds....

@ChristineMarie I am having weird issues as well. It is taking a really long time to index two genomes and it has been hanging for a full day. Were you...

I was having problems too and it seems that the newer version of boost don't seem compatible. The only way I have gotten this to work is by using their...