sunbeam
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sunbeam-labs
A robust, extensible metagenomics pipeline
**What's the feature?** A common source of bugs with sunbeam extensions is having extensions that aren't up to date with recent GitHub changes. This is the price we pay for...
## Summary - optionally run OpenAI analysis when `sunbeam run` fails - include helpful message if `openai` isn't installed - test the new `--ai` flag ## Testing - `black --check...
## Summary - start `sunbeam.ai` package with workflow planner - expose CLI at `sunbeam-ai` - add optional dependencies for AI features - test planner with a fake LLM ## Testing...
Bumps [black](https://github.com/psf/black) from 24.10.0 to 25.1.0. Release notes Sourced from black's releases. 25.1.0 Highlights This release introduces the new 2025 stable style (#4558), stabilizing the following changes: Normalize casing of...
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It would be nice to consolidate a lot of common logic for extension releases into a reusable action similar to sbx_test_action
Extensions should have configurable entry/exit points so that they can be pointed at the start of the pipeline (pre QC and decontam), the end of other extenions, etc.