Maximilian Strauss
Maximilian Strauss
**Describe the bug** Upgrading the latest streamlit seems to break the gui as streamlit.cli cannot be imported. Version 1.2.0 still seems to work.
**Describe the bug** There can be issues when there would be double-modifications on the same amino acid. This can be the case, e.g. when having a modifcation on an n-terminus...
There seems to be a bug when running converted mzML files. Example log: ``` 2022-06-01 14:13:44> Hill extraction with centroid_tol 8 and max_gap 2 2022-06-01 14:14:14> Number of hills 6,629,187,...
Upadting to the latest version of streamlit causes a bug when trying to stop a run in the GUi. ``` raise st.script_runner.RerunException(st.script_request_queue.RerunData(None)) AttributeError: module 'streamlit' has no attribute 'script_runner' ```
This is to collect all docker-related issues. ## Status There are two experimental dockerfiles `Dockerfile_bruker` and `Dockerfile_thermo`. `Dockerfile_bruker` is so far not finished. There is a split for two dockerfiles...
For assessing confidence in ouFDR estimation, we use Arbaidopsis thaliana from Uniprot. As was suggested from @JuliaS92 this is suboptimal, and one should try the A.th. fasta from TAIR.
For the Kuester_200 set, a lot of computational time (20% was for matching). This could be accelerated by parallelisation.
Currently, the GitHub repository is quite large (> 100 MB). This is mostly because of third-party modules such as the Bruker Feature Finder. It would be beneficial to be able...
**Describe the bug** When running AlphaPept via the one-click installer, QuickEdit Mode in CMD can be activated. This means that a user will freeze the application when clicking into the...
Current (pot. incomplete) wish-list and known bugs, strike-through is done. ## Nice to have - 2D/3D Implementation for Phasor - ~~Importer/Exporter for Thunderstorm~~ - ~~Implement HDBSCAN for Clustering~~ - Create...