Saba Nafees

Is there a way to extract kmers from abundance-dist?

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For example - ``` cat test_hist1.txt | head abundance,count,cumulative,cumulative_fraction 2,1,1,0.0 4,2,3,0.001 5,2,5,0.002 6,3,8,0.004 9,1,9,0.004 10,4,13,0.006 11,1,14,0.007 12,2,16,0.008 14,3,19,0.009 ``` Here's a sample output from the abundance-dist-singles.py script. Is there a...

New module: presto/filterseq

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Adding presto filterseq nf module along with test data ## PR checklist Closes #XXX - [x] This comment contains a description of changes (with reason). - [ ] If you've...

unique kmer output

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Where does the unique.skf file go once we run "ska unique"? Are there any limitations to this that we should know of? My command runs and does not give me...

Add dayhoff grouping to the current set of built-in groups to analyze protein sequence data and add tests accordingly. @olgabot