Pawel Krawczyk

I have the same problem. Trained with RNA samples. Is there any solution? Basecalling on CPU is time-consuming...

Hi, sorry for the late reply. I think that MAG completeness is not as much important as the proper input sequence length. Even with little completeness, you should be able...

Hi, you had accidentally put a dash (-) before bioperl in your command. Try this: conda install -c bioconda perl bioperl perl-getopt-long

Hi, thank for submitting that issue. I will take a closer look at that and will think about the fix. However, I think that the answer to the 3rd question...

I reverted to the latest stable release. I hope it is fixed now. Unfortunately, I moved to completely other field, thus my time for this project is seriously limited.

I think that bioconda recipe cannot be fixed, as they clearly state that if this only works ith Py3.5 they cannot support it (https://github.com/bioconda/bioconda-recipes/blob/master/recipes/plasflow/meta.yaml#L22). As I mentioned, I reverted back...

Not soon, rather second half of the year

Hi, this is likely to occur, as phages were not filtered from the training dataset and they can share some features with plasmids. We comment on that in the article....