Sébastien Besson

Results 278 comments of Sébastien Besson

Hi @juliangilbey, the version of `kryo` has actually been bumped to 4.0.1 in the recent Bio-Formats 6.6.0 release. This might help with the warnings seen above. In terms of QuPath,...

Hi @petebankhead thanks for the feedback. A few comments from our side: - we are only testing Bio-Formats on LTS Java versions (currently 8 and 11) and there is limited...

@petebankhead I just opened https://github.com/ome/bioformats/pull/3815 which includes a minimal change to the inner `DefaultJPEGReader` class that seems to fix the unit tests on Java 17 previously failing with the `IllegalAccessError`....

By incorporating, do you mean merging #3815 and #3796 into a single PR to simplify the review? If so, no objection to doing so from my side but I'll consult...

@noamza do you have public samples of typical files (ideally from the same source) saved under both systems that you could share either in this issue if it's small enough...

Just a quick clarification with regards to the initial statement > Aperio svs files are internally multi-page multi-tile OME Tiff files. Aperio SVS and OME-TIFF are completely separate file formats...

> My mental model of a pyramid file was that each pyramid level basically acted as a different scene but that may be incorrect. Seconding @zeissmicroscopy's https://github.com/AllenCellModeling/aicsimageio/issues/175#issuecomment-765418806, I think the...

Hi @JacksonMaxfield > Fortunately, considering a proposal like this isn't a breaking change we could simply introduce this function in 4.1 instead of holding off on 4.0 even longer. The...

Thanks for opening this. I see for classes of improvements. Trying to express my views and sense of priorities for each of them 1. CI & deployment pipelines: migrating to...

Cross-linking to https://github.com/ome/omero-ms-zarr/pull/71 and https://github.com/ome/ngff/pull/3 where the original `image-label` specification and the `properties` extension was proposed. 1. @DragaDoncila and/or @joshmoore might want ot comment on this but my understanding is...