Sébastien Besson

Results 116 comments of Sébastien Besson

> On a separate note, when running the test suite you will run into issues with the file leak detector using Java 17: https://github.com/jenkinsci/lib-file-leak-detector/issues/86 Thanks for cross-linking to this issue...

Testing the memo file generation on JDK 17 with one of the failing samples points at the serialization of `loci.common.Location` private field as a source of issue ``` failed to...

That's great. Do you want to add these commits to this branch so that we can get them testing in JDK 8/11 before re-enabling JDK17? I think the errors in...

[fb60d7c](https://github.com/ome/bioformats/pull/3815/commits/fb60d7c1ac01dfdae2b2b7cda9f84bb0c1a8d8fa) reverts the `aircompressor` dependency bump. While the new dependency compiled without issue with the Maven build system, this failed the Ant builds while retrieving dependencies ``` [artifact:dependencies] Downloading: io/airlift/aircompressor/0.21/aircompressor-0.21.pom...

Hi @jcupitt, one of the best representative example of a tiled pyramidal TIFF file using multi-layers supported by Bio-Formats is a large stitched TEM image published in [JCB](http://jcb.rupress.org/content/198/3/457). This image...

> A smaller sample image would be helpful too, heh. Definitely, the above was primarily meant to reflect the largest driver for this particular file format/reader. I am sure there...

Looking at https://github.com/glencoesoftware/bioformats2raw/blob/ac99da5b4fa6a8e28a4a52d3c88474f3fd22b122/src/main/java/com/glencoesoftware/bioformats2raw/Converter.java#L723-L740, a few thoughts: - should https://github.com/ome/bioformats/blob/6ef3227738e0febb4f6eaafdf1942318bd40970c/components/formats-bsd/src/loci/formats/Memoizer.java#L508-L512 be updated to support `null` reader input? All other constructors could be delegate to this single implementation. - do we need...

One of the primary questions might be to define where should the memo files be stored. Two options come to mind: - either use the in-place caching functionality of the...

Thanks @Silver-Fang, I cannot speak for all use cases and workflows but conceptually enabling in-place memoization by default and allowing to override the cache directory would work for me. In...

While trying to establish the language variations in preparation of a deprecation (as discussed in https://github.com/ome/ome-model/pull/158#issuecomment-1101227811 ), I have used the following example ```xml Experiment Plate 0 of 1 PlateAcquisition...