Samuel Marsh
Samuel Marsh
Hi, Can you please post the output of `sessionInfo()`? Thanks, Sam
Hi @iva302, If you update Seurat to current cran release (5.0.3) do you get the same error? Best, Sam
I will second @alanocallaghan ping that would be great to have this included! I’m not member of dev team so my actions are limited here but adding @Gesmira from Seurat...
Hi Nina, Thanks very much for the kind words. I can look into adding some spatial plots (mostly just haven't had need or request for it yet). What types of...
@puapinyoying Thanks for additional vote! @nina-hahn @puapinyoying I will try and get basic version into the next scCustomize release. I'll update here when live in the develop branch. Best, Sam
@puapinyoying @nina-hahn Ok we are live in develop branch with `SpatialDimPlot_scCustom` v2.1.2.9040 or greater. I'm going to close this issue as I test and move on to other things but...
Hi, If you update to the current release of Seurat (5.0.3) vs the dev version of 4.3.0 that you have installed does that resolve the issue? Best, Sam
Hi, I would recommend both of you try to update your patchwork packages. The current version is 1.2.0 which is greater than what both of you have installed. Best, Sam
Hi, Not member of dev team but hopefully can be helpful. Is the data that is in the data slot raw data or is it already normalized? If it is...
Hi Ángeles, Well I assume the depositors removed a slot so that they could cut down on object size but strange they removed counts slot and left raw counts in...