Samuel Marsh comments

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                                            Samuel Marsh

Duplicate cell name error in Cell_Highlight_Plot, even though they are not duplicate

Hi @yojetsharma, Just following up in regards to full code. Thanks! Sam

Duplicate cell name error in Cell_Highlight_Plot, even though they are not duplicate

Hi @yojetsharma, Thanks for posting code I think I see issue. I think it’s most likely that there are cells in both the HES5 and DLK1 lists that overlap so...

Seurat V2 ScaleData error:Error in if (class(x = data.use) == "dgCMatrix" | class(x = data.use) == : the condition has length > 1

closing as duplicate #7742

Seurat V2 ScaleData error:Error in if (class(x = data.use) == "dgCMatrix" | class(x = data.use) == : the condition has length > 1

sorry closing first and reopening here as more informative error message.

Seurat V2 ScaleData error:Error in if (class(x = data.use) == "dgCMatrix" | class(x = data.use) == : the condition has length > 1

Hi, Not member of dev team but hopefully can be helpful. Can you provide the full code you are running up to the point where error occurs and the output...

Error in UseMethod(generic = "DefaultAssay", object = object) : no applicable method for 'DefaultAssay' applied to an object of class "c('data.frame', 'list', 'oldClass', 'vector', 'OptionalList')"

Hi, Just confirming if this is still an issue or whether it is solved? Best, Sam

Error in UseMethod(generic = "DefaultAssay", object = object) : no applicable method for 'DefaultAssay' applied to an object of class "c('data.frame', 'list', 'oldClass', 'vector', 'OptionalList')"

No worries! Thanks for responding!!

Request dot scale parameter for Clustered_DotPlot

Hi @Evenlyeven, Thanks for kind words! Let me take look at code and get back to you. I agree that is potentially useful parameter to add. Best, Sam

Request dot scale parameter for Clustered_DotPlot

Hi @Evenlyeven Just wanted to give you an update. I have figured out how we can set new sizes for the points however, no trying to solve how to automate...

Request dot scale parameter for Clustered_DotPlot

Hi @Evenlyeven, Still working on this issue. Just wanted to give you update and let you know that currently my focus is ensuring the package is ready to send v2.0.0...