Samuel Marsh comments

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                                            Samuel Marsh

Load .RDS files directly into environment `gcs_get_object`?

Hey Mark, Really appreciate your help on this! Unfortunately still getting errors when I try myself. Although the errors are different depending on whether it is the GitHub branch or...

Cairo Dependency

Hi Guys, After hearing your thoughts and previous experience and trouble shooting the installation issue user had with my package (due to ggrastr import) I'm happy either way. I'm going...

Cairo Dependency

sounds good I'll work on PR this week! Just confirming I'll fork from the master branch? Appears the develop branch is couple commits behind master.

Issue reusing metadata column names as labels with RenameIdents()

Hi, Not member of dev team but just adding reproducible example using sample dataset in case that is helpful for devs. Good catch on the bug! @mojaveazure should this be...

Questions about figure size adjustment

Hi, Are you trying to adjust the size of figure when saved to file? Best, Sam

Questions about figure size adjustment

Hi, So as @timoast has mentioned you search R documentation for even more info but basically you can supply height width, and other image parameters in image saving functions like...

Error in runnning as.Seurat?

Hi, Could you please provide all code that you are running and output of sessionInfo? Thank you, Sam

Aesthetic bug for SCTransform number of variable genes

Hi, Not member of dev team but hopefully can be helpful. Are you referencing the text that reads something like this? ``` Get Negative Binomial regression parameters per gene Using...

Aesthetic bug for SCTransform number of variable genes

all good, no need to delete issue, I'll close it. Glad I was able to help clear things up!

RunUMAP error: Invalid DCF format

Hi, Can you please provide output of `sessionInfo()`. Also can you confirm you have uwot package installed? That is what Seurat uses for UMAP day default. Best, Sam