Roger Olivella

Work update: - I think I finished uploading the test data and modifying the README and test_data.config: - https://github.com/nf-core/modules/blob/master/tests/config/test_data.config - https://github.com/nf-core/test-datasets/tree/modules - Now I'm testing the opnems/idxml module locally and...

Before merging it, could you change the filename QC01_ae7fcd9aa17ad92971e19e90e002f864.idXML for BSA_QC_file.idXML? Or can I do it for myself? Should I remove this pull request? Thanks!

@ggabernet I just added the documentation and pull request

@JoseEspinosa I already made your requested changes. Could you merge please?

Hi @ggabernet I think that there's already a folder called "proteomics" here: https://github.com/nf-core/test-datasets/tree/modules/data/proteomics But is not following the structure you mentioned with the species and so on. What should I...

@ggabernet ok! I'll do it and let you know!

Hi again @vdemichev We observed that the GUI-genreated PDF has other charts than the Command-line-generated PDF. For instance, we can see this chart at the GUI but not command line:...

Ah yes, it makes sense. Thanks for the python script but I'm developping a single-file pipeline so I don't need it yet. I'm trying to optimize every single step but...

oops sorry @percolator but it's not working yet. Apparently I've installed the `msgf2pin` through the `percolator-converters-v3-06-linux-amd64.deb`. It does not work but the error is different from the previous one: ```bash...

Hi @caetera thank you for taking care of this. Let me know if the error can be reproduced for EThcD. In that I case I will try to open an...