roblanf

My bet so far - data.table. @DNAsaurus you have 1.9.6 in your 'bad' version, and in your good version and my good version we have 1.10.4

And on my server, the plots work fine. Note though that I just reinstalled the latest R and all the latest packages. At least to me (obviously not done until...

Hey @DNAsaurus, did you ever figure out more about what was going on here? If you have time, I'd be interested to know how you go with the latest version.

Hi Andries, If you are able to send me your `sequencing_summary.txt` file off-list, (or just the first couple of thousand lines is usually enough), I will take a look and...

Hi @DeniRibicic, Taking a look now. Will update! Rob

@DeniRibicic I couldn't reproduce your error using your input file, which suggests it's a difference in our environments. Have you updated all the required packages recently? If so, can you...

Thanks for the update @DeniRibicic. I wish I had any idea at all about what the issue was. I'll leave this open in the hopes that I can recreate it...

Interesting. My bet (and I'm clutching at straws, tbh) is that you're right that these are related. You could try different ways of calling your bash script, e.g. with `-i`...

Hi! Thanks for the bug report. Is there any chance you could send me your input file (or a link to it, or just a bit of it as long...

Hi @Claudia-Stone, Thanks for the updates. Is there any chance you know what the problem was, or what changed to make it work? If you're able to send me your...