Jesse Connell

This looks to be the same issue (with `Exit code -11`) as a few people have reported in #277. @boaty are you able to try the dev branch instead of...

I can see this occur with the stable branch (after fixing some unrelated package dependency problems we've fixed in the dev branch) including error -11. Apparently that implies a segmentation...

I think I see it. The very last few calls `megahit_asm_core` makes (according to `ltrace`) before crashing are: GOMP_loop_end_nowait(2, 0x7fdea4fef050, 48, 0) = 0 GOMP_parallel_end(2, 0x7fdea4fef050, 48, 0) = 0...

Hi @itsmisterbrown, try using the dev branch instead of the stable branch, so, something like this: ``` git clone -b dev https://github.com/sunbeam-labs/sunbeam sunbeam-dev cd sunbeam-dev ./install.sh tests/run_tests.bash -e sunbeam ```...

The segmentation fault in kraken2 could be from a few different things. Are you running this on a cluster (Maybe LSF I'm guessing from the /gpfs path)? One thing to...

Huh, that looks similar to #287. Can you try: conda list | grep openmp_mutex And paste in whatever it shows you?

Odd, it sounds like you have different packages than what I expected. Could you try updating your installed packages to exactly match our latest automated tests? There's an autogenerated package...

@TakacsBertalan sorry for the delay on a response to your issue here. This definitely could be a WSL-related problem, and sunbeam is only officially known to work on a full...

Hi hatem, I'm a little late to this but have a couple of thoughts after catching up: When you say kraken2 sequentially works but not kraken2 with sunbeam, do you...

Glad to hear it! No particular opinions from me-- just here reiterating Chunyu's message. It'll be good for the package to get some TLC. I keep hoping I could hop...