Reece Hart

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Results 228 comments of Reece Hart

Announcing cdot: a data provider to load lots of transcripts fast

This issue was closed by stalebot. It has been reopened to give more time for community review. See [biocommons coding guidelines](https://biocommons.org/contributing/coding-guidelines/) for stale issue and pull request policies. This resurrection...

normalization/projection edge cases near exon/intron boundaries

This issue was closed by stalebot. It has been reopened to give more time for community review. See [biocommons coding guidelines](https://biocommons.org/contributing/coding-guidelines/) for stale issue and pull request policies. This resurrection...

i am using docker compose file and to store some data i am using postgresql

This issue was closed by stalebot. It has been reopened to give more time for community review. See [biocommons coding guidelines](https://biocommons.org/contributing/coding-guidelines/) for stale issue and pull request policies. This resurrection...

strict_bounds parameter for AssemblyMapper

This issue was closed by stalebot. It has been reopened to give more time for community review. See [biocommons coding guidelines](https://biocommons.org/contributing/coding-guidelines/) for stale issue and pull request policies. This resurrection...

Provide utility to generate transcript variants from HGVS-ish expressions with gene names

This issue was closed by stalebot. It has been reopened to give more time for community review. See [biocommons coding guidelines](https://biocommons.org/contributing/coding-guidelines/) for stale issue and pull request policies. This resurrection...

bioconda recipe?

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Investigate replacing psycopg2 with asyncpg

This issue was closed by stalebot. It has been reopened to give more time for community review. See [biocommons coding guidelines](https://biocommons.org/contributing/coding-guidelines/) for stale issue and pull request policies. This resurrection...

move SequenceVariant.fill_ref() to separate module

This issue was closed by stalebot. It has been reopened to give more time for community review. See [biocommons coding guidelines](https://biocommons.org/contributing/coding-guidelines/) for stale issue and pull request policies. This resurrection...

Add tests for RefAlt representations

This issue was closed by stalebot. It has been reopened to give more time for community review. See [biocommons coding guidelines](https://biocommons.org/contributing/coding-guidelines/) for stale issue and pull request policies. This resurrection...

issue #606 - catch index error for variants at alignment gap

This issue was closed by stalebot. It has been reopened to give more time for community review. See [biocommons coding guidelines](https://biocommons.org/contributing/coding-guidelines/) for stale issue and pull request policies. This resurrection...