Ryan Corces
Ryan Corces
Hi @raquel-bc! Thanks for using ArchR! Please make sure that your post belongs in the Issues section. Only bugs and error reports belong in the Issues section. Usage questions and...
This is a sanity check imposed on your input data. The multiple H5 files that you are trying to important do not contain the same gene names. I've never encountered...
@dagarfield - I think that particular issue I fixed a few weeks back in `release_1.0.2` . Now, if multiple h5 files are provided, I re-order them based on genomic coordinates:...
closing due to inactivity.
actually, nevermind. I'll leave this one open. We can make it so that mis-matched genes are just excluded.
@Achernar121 - I've made quite a few changes to `import10xFeatureMatrix()` in the `dev_geneMismatch` branch. I havent created a test dataset with gene mismatches for this so this is more or...
I was hoping to see what the console output looks like on your end. And maybe you could just spot check a few genes (preferably with names starting with letters...
My previous request wasnt quite right. It isnt about alphabetical ordering, its about chromosome based ordering. So if a gene is removed on `chr4` check out genes on later chromosomes.
thanks. This appears to be a separate bug introduced recently. Will report back soon.
I believe that all of this has now been fixed on `dev_geneMismatch` if you could test and confirm on your end, I would appreciate it.