Ryan Corces

Results 113 comments of Ryan Corces

can you post your log file as well?

actually, I just realized that the logging functionality hasnt been fully implemented in addModuleScore.

yes - I'm using 1.0.3 at the moment. Will look into this a bit further.

I'm having trouble understanding whats going on here. I quickly added some code to `dev` to make sure a logfile will be created but haven added more logging of other...

@waltno - any update on this? any idea if it fails for you on the tutorial dataset?

I added some additional logging outputs in the `dev_moduleScore` branch. Could you try installing that branch and seeing if you get more info in the log file? ``` devtools::install_github("GreenleafLab/ArchR", ref="dev_moduleScore",...

sorry. will fix today and make sure it works on my end before sending it back to you.

I fixed the typo. Can you re-install and re-test?

I've made a few more logging additions. If you could re-install and test again and post your log file, that would be helpful. ``` devtools::install_github("GreenleafLab/ArchR", ref="dev_moduleScore", repos = BiocManager::repositories()) #to...

I'm fairly confident that the latest change to `dev_moduleScore` (https://github.com/GreenleafLab/ArchR/commit/12849f328789811c072ebfdf71148c6354219bd7) will fix your problem. I believe it was an off-by-one indexing error that only manifested when trying to sample a...