Rachel Clune

Results 41 comments of Rachel Clune

I'm not sure of any configuration option that will reliably make at least two helices. You can try overwriting the chosen model checkpoint file (you can find a list of...

You may be able to do this with a combination of specifying the structure you are working with in the `contigmap.contigs` but also using options like `inpaint_seq`, `provide_seq`, and for...

Out of curiosity, does the [Docker image](https://hub.docker.com/r/rosettacommons/rfdiffusion) work on your system? Also, do you know what version of CUDA your system supports? That will determine the versions of PyTorch and...

Can you provide input and output files so that we can try to recreate your issue? I'm not sure what's creating your issue, but the more information you give the...

Is this an issue with the installation of LigandMPNN, not RFdiffusion? If it is, you will likely get more help by moving your issue to the LigandMPNN repository: https://github.com/dauparas/LigandMPNN Unless...

There is a separate repository for [RFdifussion2](https://github.com/RosettaCommons/RFdiffusion2), I would recommend posting questions specifically about RFdiffusion2 there. For now I've forwarded your question to one of the authors, I'll leave another...

Unfortunately the authors of this paper have moved on to other projects and thus do not regularly check the Issues on this GitHub repo. Has anyone tried reaching out to...

Hello, are you still having an issue? It seems like the contents of this issue have been deleted?