Rachel Clune

Is this link how you are accessing the notebook? [https://colab.research.google.com/github/sokrypton/ColabDesign/blob/main/rf/examples/diffusion.ipynb](https://colab.research.google.com/github/sokrypton/ColabDesign/blob/main/rf/examples/diffusion.ipynb) Running what is already present in the notebook does not produce this error, what settings did you use? If you...

Hello, The issue with the `contigmap.contigs` option is likely not causing what you mentioned in the first paragraph. This just means that the binders being generated will only be 51...

This is what I see when I load the file you sent into my PyMol setup and select the designed residues: It isn't selecting residues in the chain and binder...

Hello, Could you provide your output and any log files? Running the macrocyclic binder example appears to have generated macrocycles on my machine. (Files attached.) The only modification I made...

Have you looked at this issue: [Issue 359](https://github.com/RosettaCommons/RFdiffusion/issues/359) - it is discussing the same thing.

This [issue](https://github.com/RosettaCommons/RFdiffusion/issues/359) discusses the same problem. It seems that for some people reconfiguring the SE3 environment helped.

I'm not sure why the DGL is not working well with your GPUs, from the 'Steps to Reproduce' it seems like you are following the installation instructions for RFdiffusion correctly....

Apologies for missing that detail! Our Docker image also does not fully work on AArch64 architectures, though we are aware of the issue and are working on changing the image....

Out of curiosity, which CoLab notebook are you using? Can you respond with the link? There are some known issues with the code not always producing cyclic peptides, even when...

Glad you were able to work, even if it meant using a VM. Adding support for AArch/ARM systems is on our list of things to work on, we will keep...