mixer
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precimed
Causal Mixture Model for GWAS summary statistics
The documentation suggests excluding the 6:26000000-34000000 range (`python sumstats.py qc --exclude-ranges 6:26000000-34000000 ...`), but the question came up that this range should be widened to the 6:25000000-34000000. Other tools, use...
Hello, Can MiXeR analysis be performed on any phenotype, or are there minimum N, Neff or SNP-h2 requirements? After reading some papers, I understood it is suggested to have over...
I git the singularity container of mixer (https://github.com/comorment/mixer). I have installed mixer through singularity (figure shows), but when I run mix.py, the log file noted the version was still 1.2.0....
Hi, I got an error when installing MiXeR using the second method. ``` :~/mixer# cmake .. && make bgmg -j16 CMake Error: The source directory "/root" does not appear to...
The question is as titled and I am concerned about performing the wrong analysis and getting the wrong results, I look forward to your replies, thank you!
 I run mixer bivarate model on 2 traits named CP and OP and then plot the figure using the following commands python mixer_figures.py two --json-fit fit.json --json-test test.json --out...
Following README file to generate .snps files gives an error.
Hi, I'm running univariate analyses using MIXER, and my code looks like this. However, I've noticed that a single for loop is taking five hours or even longer to complete,...
I am running MiXeR on a Unix-based HPC server in my conda environment. All the previous steps seem to run without problem. However, when I tried to run the combine...
