Jonathan Manning

@nf-core-bot fix linting

Thanks for review @ramprasadn! Requested changes done.

Thanks for the guidance @ramprasadn - how's this?

> Module looks good, just a few changes to the docs and it should be 👌🏻 Done!

> As I understand it, this module is for converting a GTF file to an annotation table. So within a pipeline, it will be called just once on the GTF...

Thanks for reviews @ggabernet @ramprasadn !

[shinyngs](https://github.com/pinin4fjords/shinyngs) is an R package I wrote a few years ago for automatically building shiny-driven data mining tools like [this](https://pinin4fjords.shinyapps.io/shinyngs_example/) given only structured data on expression, differential expression etc. There...

@maxulysse am I right in thinking that much of this is done now? I'm a novice, but I'm seeing e.g. https://github.com/nf-core/modules/blob/master/subworkflows/nf-core/bam_stats_samtools/main.nf already as of quite recently.

I've been building some exploratory analysis plots (useful for gene expression) built on common functions developed for shinyngs. These include: - Boxplots/ distribution plots - 2D/ 3D PCA - Sample...

Encountered this problem on Mavericks with up-to-date versions of OSXFuse and MacFusion. XQuartz made it go away.