phenopacket-schema
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phenopackets
Repository for the GA4GH phenopacket schema
```python phenopacket = Parse(Phenopacket(), text=jsfile.read()) ``` should be ```python phenopacket = Parse(message=Phenopacket(), text=jsfile.read()) ```
The table `VariantInterpretation` lists a field `variant`. However, the name of the field should be `variation_descriptor` to be in sync with the proto files.
The RTD pages do not mention `consanguinous_parents` flag but the flag is part of the schema.
https://phenopacket-schema.readthedocs.io/en/latest/measurement.html The table title: "Definition of the Quantity element" should be for the Measurement element
Hi folks, thank you for a super useful resource! We a bit new on the track, and currently find ourselves more or less having to pass a couple of images...
The PR improves the code of `phenopackets` - the library for working with phenopackets in Python. ### Current state of things `phenopackets` consists of the Python bindings for Phenopacket Schema...
@julesjacobsen The PR fixes several small inaccuracies in the documentation, mostly deviations from the protobuf schema. Fixes #316, #339, #344, #350, #351
On https://phenopacket-schema.readthedocs.io/en/latest/procedure.html > The Procedure element represents a clinical procedure performed on a subject. For example a surgical or diagnostic procedure such as a biopsy. > If the Procedure element...