Paul Grosu

Let's define as a group issue https://github.com/CCI-MOC/ims/issues/138 first, and then we can properly fix this. In any case, we will still have to move these hard-coded instantiations outside of the...

Besides the offset-with-limit approach Kaushik mentioned, you probably want a sort feature so you can perform a seek-filter (i.e. retrieve after some id) with a limit.

Just curious, what would be the upper limit of the number of pages and page sizes? Imagine if you will this scenario :) You got your DICOM images, but they...

@one-matrix I think you need Python 3.8 based on the following: https://github.com/google/nucleus/blob/68d3947fafba1337f294c0668a6e1c7f3f1273e3/nucleus/pip_package/egg_files/PKG-INFO#L27

@one-matrix I see you're trying to install google-nucleus 0.5.6, but now the current version is 0.6.0: https://pypi.org/project/google-nucleus/ Also the error you're seeing is saying that there is a newer version...

@one-matrix If you replace it with the following it should work: ``` !pip download google-nucleus !tar xzf google_nucleus-0.6.0.tar.gz %cd google_nucleus-0.6.0/ %rm -rf /usr/local/lib/python3.10/dist-packages/google_nucleus.egg-info !python setup.py clean !python setup.py install !pip...

Hi @one-matrix, So here's the simplest way I was able to get it to run. 1) Replace the whole `!pip install ...` with the following code and execute it: ```...

@one-matrix One more small thing, you will need to move tensorflow imports above the nucleus imports to not get an error. Below is the code: ```Python import subprocess nucleus_code =...

@one-matrix Well, with one variation to pysam. Nucleus can create TensorFlow records of your data opening the world of machine learning to genomics. Basically think of different sets of genomic...

Hi @Tharindu-Nirmal, It's possible to do, but really complex to install and properly configure given the new version of the CoLab environment. So the current Google CoLab now runs on...