pgaudet

Thanks @raymond91125 OK, this looks like a pathway. The reason why I ran into is in https://github.com/geneontology/go-ontology/issues/21790 The logical definition was 'glycerol metabolic process' and ('has part' some 'glycerol-3-phosphate dehydrogenase...

Hi @sjm41 As described in the doc here: https://wiki.geneontology.org/Guidelines_for_new_Molecular_Functions#NAD/NADP_cofactors 'NAD(P)H' terms should be used for cases where the cofactor is not known. If we always know the cofactor, them we...

Hi @ValWood Discussing with @kaxelsen here in Geneva - This is a very non-specific dioxygenase/demethylase; should we create terms for all substrates? On the other hand, the methylases seem more...

I think we have decided to not create sensu-specific terms unless we describe widely different CC or BPs. In this case the merge seems correct. Pinging @cmungall and @thomaspd for...

Maybe one way to assess this is to see which terms are being used. Out of the current set of 70, only 15 are being used (all evidence codes included):...

Ontology call: @cmungall best solution is the simplification, in conjunction with rules that would make sure that the correct cellular anatomical entity is also annotated, in cases where this can...

Fixed some relations to address issue reported by @alexsign : > GO:0045282 GO:0045258 P but they already is_a in the other direction also affects: GO:0045281, GO:0045257, GO:0045273, GO:0045274

Something is not right about GO:0004651 | polynucleotide 5'-phosphatase activity - | GO ID | Label | EC | RHEA | EC & RHEA Description | |-------------|-----------------------------------------|-------------|---------------------------------------|-------------------------------------------| | GO:0140818 |...

Related to #24892

Dear all, The decision has been made to obsolelete GO:0102148 N-acetyl-beta-D-galactosaminidase activity. The reason for obsoletion is that this term was created by mistake. This term has no annotations, and...