pgaudet

Hi @slaulederkind First, apologies for the long delay in the response. Looking at this term request, myosin **mediates** muscle contraction, so would you be annotating regulation to describe a phenotype?...

what's the status of this?

We want to merge all those. Maybe to discuss on an ontology call for the strategy? Should we drop the 'cellular' terms (since this is implied) ? Thanks, Pascale

- [x] GO:0006520 ~cellular~ amino acid metabolic process - [x] GO:0008652 ~cellular~ amino acid biosynthetic process - [x] GO:0009063 ~cellular~ amino acid catabolic process - [x] GO:0009072 aromatic amino acid...

Hi agree this branch has many problems. First of all I dont think 'actin filament' should contain 'associated proteins' (current def= "A filamentous structure formed of a two-stranded helical polymer...

OK - I can ask a Dicty person about the actin filaments versus network and cytoskeleton. What's the action point right now: check if we can obsolete 'actin filament reorganization'...

Hi @amandamackie Is this process mediated by a protein ? Looking quickly at the papers it seems like they measure deamidation of target proteins, not which proteins *mediate* the deamidation....

Great thanks - that wasn't obvious from the papers you sent (apologies if I didn't look closely enough though!)

Looking (quickly again) at https://en.wikipedia.org/wiki/Protein-glutamate_methylesterase, based on the fact that E. coli CheB (P07330) is annotated to EC 3.1.1.61 (http://www.sbcs.qmul.ac.uk/iubmb/enzyme/EC3/1/1/61.html), it looks like the enzyme catalyzes a demethylation, not a...

Isn't this inconsistent with other similar terms? Ie they are all named 'peptidyl...', aren't they? Le mar. 10 juil. 2018 à 3:46 PM, Harold Drabkin a écrit : > maybe...